Mercredi 29 Juin 2022
Data Papers
Les Data Papers
Le Data Paper est une publication scientifique dont le but principal est de décrire un jeu de données ou un ensemble de jeux de données, plutôt que de rendre compte d’une enquête de recherche.
Quelques exemples de data papers
- Lepareur F, Manceau M, Reyjol Y, Touroult J, Robert S, Vest F, Horellou A, Poncet L (2022) The nationwide ‘ZNIEFF’ inventory in France: an open dataset of more than one million species data in zones of high ecological value. Biodiversity Data Journal 10: e71222. https://doi.org/10.3897/BDJ.10.e71222
- Kakila database: Towards a FAIR community approved database of cetacean presence in the waters of the Guadeloupe Archipelago, based on citizen science. Coché L, Arnaud E, Bouveret L, David R, Foulquier E, Gandilhon N, Jeannesson E, Le Bras Y, Lerigoleur E, Lopez PJ, Madon B, Sananikone J, Sèbe M, Le Berre I, Jung J-L (2021) Biodiversity Data Journal 9: e69022. https://doi.org/10.3897/BDJ.9.e69022
- Distribution of macroalgae in the area of Calvi (Corsica). Katz L, Sirjacobs D, Gobert S, Lejeune P, Danis B (2021) Biodiversity Data Journal 9: e68249.
- Occurrence data for the two cryptic species of Cacopsylla pruni (Hemiptera: Psylloidea). Sauvion N, Peccoud J, Meynard CN, Ouvrard D (2021) Biodiversity Data Journal 9: e68860. https://doi.org/10.3897/BDJ.9.e68860
- Revision of the species Chalcidoidea (Insecta, Hymenoptera) deposited in the Museum of Natural History of the Scientific Institute in Rabat (Morocco) Kissayi, K. Villemant, C. Douaik, A. Bentata, F. Labhilili, M. Benhoussa, A. (2020) Arxius de Miscel·lània Zoològica. https://doi.org/10.15470/q0ya99
- Species diversity of myrmecofauna (Hymenoptera, Formicidae) on the southern slope of Djurdjura National Park (Northern Algeria) Labbacci, A. Marniche, F. Daoudi–Hacini, S. Boulay, R. Milla, A. (2020) Arxius de Miscel·lània Zoològica. https://doi.org/10.15470/htbs0q
- Transdisciplinary Bioblitz: Rapid biotic and abiotic inventory allows studying environmental changes over 60 years at the Biological Field Station of Paimpont (Brittany, France) and opens new interdisciplinary research opportunities Nicolai A, Guernion M, Guillocheau S, Hoeffner K, Le Gouar P, Ménard N, Piscart C, Vallet D, Hervé MET, Benezeth E, Chedanne H, Blémus J, Vernon P, Cylly D, Hotte H, Loïs G, Mai B, Perez G, Ouisse T, Monard C, Wiegand C, Caudal J-P, Butet A, Dahirel M, Barbe L, Balbi M, Briand V, Bormans M, Charrier M, Bouger G, Jung V, Le Lann C, Pannard A, Petillon J, Rantier Y, Marguerie D, Tougeron K, Devogel P, Dugravot S, Dubos T, Garrin M, Carnet M, Gouraud C, Chambet A, Esnault J, Poupelin M, Welk E, Bütof A, Dubois GF, Humbert G, Marie-Réau O, Norvez O, Richard G, Froger B, Rochais C, Potthoff M, Ayati K, Bellido A, Rissel A, Santonja M, Farcy J-O, Collias E, Sene L, Cluzeau D, Supper R (2020). Biodiversity Data Journal 8: e50451.. https://doi.org/10.3897/BDJ.7.e31817
- Continental data on cave-dwelling spider communities across Europe (Arachnida: Araneae). Mammola S, Cardoso P, Angyal D, Balázs G, Blick T, Brustel H, Carter J, Ćurčić S, Danflous S, Dányi L, Déjean S, Deltshev C, Elverici M, Fernández J, Gasparo F, Komnenov M, Komposch C, Kováč L, Kunt KB, Mock A, Moldovan O, Naumova M, Pavlek M, Prieto CE, Ribera C, Rozwałka R, Růžička V, Vargovitsh RS, Zaenker S, Isaia M (2019) Continental data on cave-dwelling spider communities across Europe (Arachnida: Araneae). Biodiversity Data Journal 7: e38492. https://doi.org/10.3897/BDJ.8.e50451
- Frozen Zoo: a collection of permafrost samples containing viable protists and their viruses Malavin S, Shmakova L, Claverie J-M, Rivkina E (2020). Biodiversity Data Journal 8: e51586. https://doi.org/10.3897/BDJ.8.e51586
- The retrospective analysis of Antarctic tracking data project Ropert-Coudert, Y., Van de Putte, A.P., Reisinger, R.R. et al. Sci Data 7, 94 (2020). https://doi.org/10.1038/s41597-020-0406-x
- Bat species richness and activity in Dghoumes National Park (Southwest Tunisia): a preliminary survey Dalhoumi, R. Aissa, P. Beyrem, H. Aulagnier, S. Arxius de Miscel·lània Zoològica, 18: 89-100 https://doi.org/10.32800/amz.2020.18.0089
- Standardised inventories of spiders (Arachnida, Araneae) of Macaronesia II: The native forests and dry habitats of Madeira archipelago (Madeira and Porto Santo islands) Malumbres-Olarte J, Boieiro M, Cardoso P, Carvalho R, Crespo LCF, Gabriel R, Macías Hernández N, Paulo OS, Pereira F, Rego C, Ros-Prieto A, Silva I, Vieira A, Rigal F, Borges PAV (2020) Biodiversity Data Journal 8: e47502. https://doi.org/10.3897/BDJ.8.e47502
- Aquatic eDNA for monitoring French Guiana biodiversity. Murienne J, Cantera I, Cerdan A, Cilleros K, Decotte J-B, Dejean T, Vigouroux R, Brosse S (2019). Biodiversity Data Journal 7: e37518. https://doi.org/10.3897/BDJ.7.e37518
- The PPEAO experimental fishing dataset: Fish from West African estuaries, lagoons and reservoirs. Simier M, Ecoutin J, Tito de Morais L (2019). Biodiversity Data Journal 7: e31374. https://doi.org/10.3897/BDJ.7.e31374
- A benchmark dataset of herbarium specimen images with label data. Dillen M, Groom Q, Chagnoux S, Güntsch A, Hardisty A, Haston E, Livermore L, Runnel V, Schulman L, Willemse L, Wu Z, Phillips S (2019). Biodiversity Data Journal 7: e31817. https://doi.org/10.3897/BDJ.7.e31817
- Continental data on cave-dwelling spider communities across Europe (Arachnida: Araneae). Mammola S, Cardoso P, Angyal D, Balázs G, Blick T, Brustel H, Carter J, Ćurčić S, Danflous S, Dányi L, Déjean S, Deltshev C, Elverici M, Fernández J, Gasparo F, Komnenov M, Komposch C, Kováč L, Kunt KB, Mock A, Moldovan O, Naumova M, Pavlek M, Prieto CE, Ribera C, Rozwałka R, Růžička V, Vargovitsh RS, Zaenker S, Isaia M (2019) Continental data on cave-dwelling spider communities across Europe (Arachnida: Araneae). Biodiversity Data Journal 7: e38492. https://doi.org/10.3897/BDJ.7.e38492
- Fungi of French Guiana gathered in a taxonomic, environmental and molecular dataset. Jaouen, G., Sagne, A., Buyck, B. et al. Fungi of French Guiana gathered in a taxonomic, environmental and molecular dataset. Sci Data 6, 206 (2019) https://doi.org/10.1038/s41597-019-0218-z
- Standardised inventories of spiders (Arachnida, Araneae) of Macaronesia I: The native forests of the Azores (Pico and Terceira islands) Malumbres-Olarte J, Cardoso P, Crespo L, Gabriel R, Pereira F, Carvalho R, Rego C, Nunes R, Ferreira M, Amorim I, Rigal F, Borges P (2019) Standardised inventories of spiders (Arachnida, Araneae) of Macaronesia I: The native forests of the Azores (Pico and Terceira islands). Biodiversity Data Journal 7: e32625. https://doi.org/10.3897/BDJ.7.e32625
- FLOTROP, a massive contribution to plant diversity data for open ecosystems in northern tropical Africa Taugourdeau, S., Daget, P., Chatelain, C. et al. FLOTROP, a massive contribution to plant diversity data for open ecosystems in northern tropical Africa. Sci Data 6, 118 (2019) https://doi.org/10.1038/s41597-019-0120-8
- Antarctic and Sub-Antarctic Asteroidea database. Moreau C, Mah C, Agüera A, Améziane N, Barnes D, Crokaert G, Eléaume M, Griffiths H, Guillaumot C, Hemery LG, Jażdżewska A, Jossart Q, Laptikhovsky V, Linse K, Neill K, Sands C, Saucède T, Schiaparelli S, Siciński J, Vasset N, Danis B (2018) ZooKeys 747: 141-156. https://doi.org/10.3897/zookeys.747.22751
- Southern Ocean Echinoids database – An updated version of Antarctic, Sub-Antarctic and cold temperate echinoid database. Fabri-Ruiz S, Saucède T, Danis B, David B (2017). ZooKeys 697: 1-20. https://doi.org/10.3897/zookeys.697.14746
- Abundance indices and biological traits of juvenile salmon (Salmo salar) sampled in three rivers on the Atlantic and Channel coasts (France). Marchand F, Beaulaton L, Prévost E, Delanoë R, Destouches J-P, Gueraud F, Guilloux Y, Jeannot N, Huchet E, Lange F, Rives J, Tremblay J, Herrard N, Azam D. (2017) Biodiversity Data Journal 5: e15125 - https://doi.org/10.3897/BDJ.5.e15125
- Building a database for long-term monitoring of benthic macrofauna in the Pertuis-Charentais (2004-2014). Philippe A, Plumejeaud-Perreau C, Jourde J, Pineau P, Lachaussée N, Joyeux E, Corre F, Delaporte P, Bocher P (2017) Biodiversity Data Journal 5: e10288. https://doi.org/10.3897/BDJ.5.e10288
- The French Muséum national d’histoire naturelle vascular plant herbarium collection dataset Gwenaël Le Bras, Marc Pignal, Marc L. Jeanson, Serge Muller, Cécile Aupic, Benoît Carré, Grégoire Flament, Myriam Gaudeul, Claudia Gonçalves, Vanessa R. Invernón, Florian Jabbour, Elodie Lerat, Porter P. Lowry, Bérangère Offroy, Eva Pérez Pimparé, Odile Poncy, Germinal Rouhan, Thomas Haevermans. Scientific Data 4, Article number: 170016 (2017). DOI: 10.1038/sdata.2017.16
- The African Crane Database (1978-2014): Records of three threatened crane species Gruidae from southern and eastern Africa. Smith T, Page-Nicholson S, Morrison K, Gibbons B, Jones M, van Niekerk M, Botha B, Oliver K, McCann K, Roxburgh L (2016). Biodiversity Data Journal 4: e9794. https://doi.org/10.3897/BDJ.4.e9794
- Echinoids of the Kerguelen Plateau – occurrence data and environmental setting for past, present, and future species distribution modelling. Guillaumot C, Martin A, Fabri-Ruiz S, Eléaume M, Saucède T (2016) ZooKeys 630: 1-17. https://doi.org/10.3897/zookeys.630.9856
- GuiaTreeKey, a multi-access electronic key to identify tree genera in French Guiana. Engel J, Brousseau L, Baraloto C (2016) PhytoKeys 68: 27-44. https://doi.org/10.3897/phytokeys.68.8707
- RAINBIO: a mega-database of tropical African vascular plants distributions Dauby G, Zaiss R, Blach-Overgaard A, Catarino L, Damen T, Deblauwe V, Dessein S, Dransfield J, Droissart V, Duarte MC, Engledow H, Fadeur G, Figueira R, Gereau RE, Hardy OJ, Harris DJ, de Heij J, Janssens S, Klomberg Y, Ley AC, Mackinder BA, Meerts P, van de Poel JL, Sonké B, Sosef MSM, Stévart T, Stoffelen P, Svenning J-C, Sepulchre P, van der Burgt X, Wieringa JJ, Couvreur TLP (2016) PhytoKeys 74: 1-18. https://doi.org/10.3897/phytokeys.74.9723
- Systematics and biology of some species of Micrurapteryx Spuler (Lepidoptera, Gracillariidae) from the Holarctic Region, with re-description of M. caraganella (Hering) from Siberia. Kirichenko N, Triberti P, Mutanen M, Magnoux E, Landry J, Lopez-Vaamonde C (2016) ZooKeys 579: 99-156. https://doi.org/10.3897/zookeys.579.7166
- An exhaustive inventory of coniferous trees in an agricultural landscape. Rousselet J, Roques A, Garcia J, Rossi J (2015) Biodiversity Data Journal 3: e4660. https://doi.org/10.3897/BDJ.3.e4660
- East Weddell Sea echinoids from the JR275 expedition. Saucède T, Griffiths H, Moreau C, Jackson JA, Sands C, Downey R, Reed A, Mackenzie M, Geissler P, Linse K (2015) ZooKeys 504: 1-10. https://doi.org/10.3897/zookeys.504.8860
- Fauna Europaea: Gastrotricha. Balsamo M, d`Hondt J, Kisielewski J, Todaro M, Tongiorgi P, Guidi L, Grilli P, de Jong Y (2015) Biodiversity Data Journal 3: e5800. https://doi.org/10.3897/BDJ.3.e5800
- Online database for mosquito (Diptera, Culicidae) occurrence records in French Guiana. Talaga S, Murienne J, Dejean A, Leroy C (2015) ZooKeys 532: 107-115. doi: 10.3897/zookeys.532.6176
- PASSIFOR: A reference library of DNA barcodes for French saproxylic beetles (Insecta, Coleoptera). Rougerie R, Lopez-Vaamonde C, Barnouin T, Delnatte J, Moulin N, Noblecourt T, Nusillard B, Parmain G, Soldati F, Bouget C (2015) Biodiversity Data Journal 3: e4078. https://doi.org/10.3897/BDJ.3.e4078
- SIFlore, a dataset of geographical distribution of vascular plants covering five centuries of knowledge in France: Results of a collaborative project coordinated by the Federation of the National Botanical Conservatories. Just A, Gourvil J, Millet J, Boullet V, Milon T, Mandon I, Dutrève B (2015) PhytoKeys 56: 47-60. doi: 10.3897/phytokeys.56.5723
- The Myriapoda and Onychophora collection (MY) of the Muséum national d’Histoire naturelle (MNHN, Paris). Le Bras G, Geoffroy J-J, Albenga L, Mauriès J-P (2015) ZooKeys 518: 139-153. doi: 10.3897/zookeys.518.10223
- The Jean Guttierez Spider Mite Collection. Migeon A. ZooKeys 489: 15-24 (2015) doi: 10.3897/zookeys.489.9292
- The spatiotemporal pattern of earthworm community in the grass savannas of Lamto (Ivory Coast). Rossi J, Lavelle P (2015) Biodiversity Data Journal 3: e6515. https://doi.org/10.3897/BDJ.3.e6515
- An occurence records database of French Guiana harvestmen (Arachnida, Opiliones). Cally S, Solbès P, Grosso B, Murienne J (2014) Biodiversity Data Journal 2: e4244. doi: 10.3897/BDJ.2.e4244
- A database of life-history traits of European amphibians. Trochet A, Moulherat S, Calvez O, Stevens V, Clobert J, Schmeller D (2014) Biodiversity Data Journal 2: e4123. https://doi.org/10.3897/BDJ.2.e4123
- Life-history trait database of European reptile species. Grimm A, Ramírez AMP, Moulherat S, Reynaud J, Henle K (2014) Nature Conservation 9: 45-67. https://doi.org/10.3897/natureconservation.9.8908
- Tree diversity of the Dja Faunal Reserve, southeastern Cameroon. Sonké B, Couvreur T (2014) Biodiversity Data Journal 2: e1049. https://doi.org/10.3897/BDJ.2.e1049
- Circumpolar dataset of sequenced specimens of Promachocrinus kerguelensis (Echinodermata, Crinoidea). Hemery LG, Améziane N, Eléaume M (2013) ZooKeys 315: 55–64. doi: 10.3897/zookeys.315.5673
- Fossil echinoid (Echinoidea, Echinodermata) diversity of the Early Cretaceous (Hauterivian) in the Paris Basin (France). Thomas Saucède (2013) Zookeys doi: 10.3897/zookeys.325.5085
- Antarctic, Sub-Antarctic and cold temperate echinoid database. Pierrat et al. ZooKeys 204: 47–52 (2012)
