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Dimanche 29 Janvier 2023

Data Papers

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Les Data Papers

Le Data Paper est une publication scientifique dont le but principal est de décrire un jeu de données ou un ensemble de jeux de données, plutôt que de rendre compte d’une enquête de recherche.

 

Quelques exemples de data papers

2022
  • Small terrestrial mammals (Rodentia and Soricomorpha) along a gradient of forest anthropization (reserves, managed forests, urban parks) in France. Julien Pradel, Marie Bouilloud, Anne Loiseau, Sylvain Piry, Maxime Galan, Emmanuelle Artige, Guillaume Castel, Julien Ferrero, Romain Gallet, Geoffrey Thuel, Nathalie Vieira, Nathalie Charbonnel (2022). Biodiversity Data Journal : e95662. https://doi.org/10.3897/arphapreprints.e95662
  • Myctobase, a circumpolar database of mesopelagic fishes for new insights into deep pelagic prey fields. Woods, B., Trebilco, R., Walters, A. et al. Sci Data 9, 404 (2022). https://doi.org/10.1038/s41597-022-01496-y
  • AIMSurv: First pan-European harmonized surveillance of Aedes invasive mosquito species of relevance for human vector-borne diseases. Miguel Ángel Miranda,Carlos Barceló,Daniele Arnoldi,Xenia Augsten,Karin Bakran-lebl,George Balatsos,Mikel Bengoa,Philippe Bindler,Kristina Boršová,Maria Bourquia,Daniel Bravo-barriga,Viktória Čabanová,Beniamino Caputo,Maria Christou,Sarah Delacour,Roger Eritja,Ouafaa Fassi-fihri,Martina Ferraguti,Eleonora Flacio,Eva Frontera,Hans-peter Fuehrer,Ana L. García-pérez,Pantelis Georgiades,Sandra Gewehr,Fátima Goiri,Mikel Alexander González,Martin Gschwind,Rafael Gutiérrez-lópez,Cintia Horváth,Adolfo Ibáñez-justicia,Viola Jani,Përparim Kadriaj,Katja Kalan,Mihaela Kavran,Ana Klobucar,Kornélia Kurucz,Javier Lucientes,Renke Lühken,Sergio Magallanes,Giovanni Marini,Angeliki F. Martinou,Alice Michelutti,Andrei Daniel Mihalca,Tomás Montalvo,Fabrizio Montarsi,Spiros Mourelatos,Nesade Muja-bajraktari,Pie Müller,Gregoris Notarides,Hugo Costa Osório,José A. Oteo,Kerem Oter,Igor Pajović,John R. B. Palmer,Suncica Petrinic,Cristian Răileanu,Christian Ries,Elton Rogozi,Ignacio Ruiz-arrondo,Isis Sanpera-calbet,Nebojša Sekulić,Kivanc Sevim,Kurtesh Sherifi,Cornelia Silaghi,Manuel Silva,Nikolina Sokolovska,Zoltán Soltész,Tatiana Sulesco,Jana Šušnjar,Steffanie Teekema,Andrea Valsecchi,Marlen Ines Vasquez,Enkelejda Velo,Antonios Michaelakis,William Wint,Dušan Petrić,Francis Schaffner,Alessandra Della Torre,Consortium Aim-cost/aim-surv,Gigabyte,2022 https://doi.org/10.46471/gigabyte.57
  • The first large-scale All Taxa Biodiversity Inventory in Europe: description of the Mercantour National Park ATBI data sets. Ichter J, Gargominy O, Leccia M-F, Robert S, Poncet L (2022). ARPHA Preprints. https://doi.org/10.3897/arphapreprints.e85910
  • Geohistorical dataset of ten plant species introduced into Occitania (France). Claudel M, Lerigoleur E, Brun C, Guillerme S (2022). Biodiversity Data Journal 10: e76283. https://doi.org/10.3897/BDJ.10.e76283
  • The nationwide ‘ZNIEFF’ inventory in France: an open dataset of more than one million species data in zones of high ecological value. Lepareur F, Manceau M, Reyjol Y, Touroult J, Robert S, Vest F, Horellou A, Poncet L (2022). Biodiversity Data Journal 10: e71222. https://doi.org/10.3897/BDJ.10.e71222
2021
  • Monitoring Arthropods in Azorean Agroecosystems: the project AGRO-ECOSERVICES. Borges PAV, Nunes R, Lamelas-López L, Pereira E, Costa R, Monjardino P, Lopes DH, Soares AO, Gil A, Rigal F, Ferrante M, Lövei GL (2021). Biodiversity Data Journal 9: e77548. https://doi.org/10.3897/BDJ.9.e77548
  • The Belgica 121 expedition to the Western Antarctic Peninsula: a detailed biodiversity census. Danis B, Christiansen H, Guillaumot C, Heindler FM, Jossart Q, Moreau C, Pasotti F, Robert H, Wallis B, Saucède T (2021). Biodiversity Data Journal 9: e70590. https://doi.org/10.3897/BDJ.9.e70590
  • Kakila database: Towards a FAIR community approved database of cetacean presence in the waters of the Guadeloupe Archipelago, based on citizen science. Coché L, Arnaud E, Bouveret L, David R, Foulquier E, Gandilhon N, Jeannesson E, Le Bras Y, Lerigoleur E, Lopez PJ, Madon B, Sananikone J, Sèbe M, Le Berre I, Jung J-L (2021) Biodiversity Data Journal 9: e69022. https://doi.org/10.3897/BDJ.9.e69022
  • Distribution of macroalgae in the area of Calvi (Corsica). Katz L, Sirjacobs D, Gobert S, Lejeune P, Danis B (2021) Biodiversity Data Journal 9: e68249.
  • Occurrence data for the two cryptic species of Cacopsylla pruni (Hemiptera: Psylloidea). Sauvion N, Peccoud J, Meynard CN, Ouvrard D (2021) Biodiversity Data Journal 9: e68860. https://doi.org/10.3897/BDJ.9.e68860
2020
  • Revision of the species Chalcidoidea (Insecta, Hymenoptera) deposited in the Museum of Natural History of the Scientific Institute in Rabat (Morocco) Kissayi, K. Villemant, C. Douaik, A. Bentata, F. Labhilili, M. Benhoussa, A. (2020) Arxius de Miscel·lània Zoològica.  https://doi.org/10.15470/q0ya99
  • Species diversity of myrmecofauna (Hymenoptera, Formicidae) on the southern slope of Djurdjura National Park (Northern Algeria) Labbacci, A. Marniche, F. Daoudi–Hacini, S. Boulay, R. Milla, A. (2020) Arxius de Miscel·lània Zoològica. https://doi.org/10.15470/htbs0q
  • Transdisciplinary Bioblitz: Rapid biotic and abiotic inventory allows studying environmental changes over 60 years at the Biological Field Station of Paimpont (Brittany, France) and opens new interdisciplinary research opportunities Nicolai A, Guernion M, Guillocheau S, Hoeffner K, Le Gouar P, Ménard N, Piscart C, Vallet D, Hervé MET, Benezeth E, Chedanne H, Blémus J, Vernon P, Cylly D, Hotte H, Loïs G, Mai B, Perez G, Ouisse T, Monard C, Wiegand C, Caudal J-P, Butet A, Dahirel M, Barbe L, Balbi M, Briand V, Bormans M, Charrier M, Bouger G, Jung V, Le Lann C, Pannard A, Petillon J, Rantier Y, Marguerie D, Tougeron K, Devogel P, Dugravot S, Dubos T, Garrin M, Carnet M, Gouraud C, Chambet A, Esnault J, Poupelin M, Welk E, Bütof A, Dubois GF, Humbert G, Marie-Réau O, Norvez O, Richard G, Froger B, Rochais C, Potthoff M, Ayati K, Bellido A, Rissel A, Santonja M, Farcy J-O, Collias E, Sene L, Cluzeau D, Supper R (2020). Biodiversity Data Journal 8: e50451.. https://doi.org/10.3897/BDJ.7.e31817
  • Continental data on cave-dwelling spider communities across Europe (Arachnida: Araneae). Mammola S, Cardoso P, Angyal D, Balázs G, Blick T, Brustel H, Carter J, Ćurčić S, Danflous S, Dányi L, Déjean S, Deltshev C, Elverici M, Fernández J, Gasparo F, Komnenov M, Komposch C, Kováč L, Kunt KB, Mock A, Moldovan O, Naumova M, Pavlek M, Prieto CE, Ribera C, Rozwałka R, Růžička V, Vargovitsh RS, Zaenker S, Isaia M (2019) Continental data on cave-dwelling spider communities across Europe (Arachnida: Araneae). Biodiversity Data Journal 7: e38492. https://doi.org/10.3897/BDJ.8.e50451
  • Frozen Zoo: a collection of permafrost samples containing viable protists and their viruses Malavin S, Shmakova L, Claverie J-M, Rivkina E (2020). Biodiversity Data Journal 8: e51586.  https://doi.org/10.3897/BDJ.8.e51586
  • The retrospective analysis of Antarctic tracking data project Ropert-Coudert, Y., Van de Putte, A.P., Reisinger, R.R. et al. Sci Data 7, 94 (2020). https://doi.org/10.1038/s41597-020-0406-x
  • Bat species richness and activity in Dghoumes National Park (Southwest Tunisia): a preliminary survey Dalhoumi, R. Aissa, P. Beyrem, H. Aulagnier, S.  Arxius de Miscel·lània Zoològica, 18: 89-100  https://doi.org/10.32800/amz.2020.18.0089
  •  Standardised inventories of spiders (Arachnida, Araneae) of Macaronesia II: The native forests and dry habitats of Madeira archipelago (Madeira and Porto Santo islands)  Malumbres-Olarte J, Boieiro M, Cardoso P, Carvalho R, Crespo LCF, Gabriel R, Macías Hernández N, Paulo OS, Pereira F, Rego C, Ros-Prieto A, Silva I, Vieira A, Rigal F, Borges PAV (2020) Biodiversity Data Journal 8: e47502.  https://doi.org/10.3897/BDJ.8.e47502
2019
  • Aquatic eDNA for monitoring French Guiana biodiversity. Murienne J, Cantera I, Cerdan A, Cilleros K, Decotte J-B, Dejean T, Vigouroux R, Brosse S (2019). Biodiversity Data Journal 7: e37518.  https://doi.org/10.3897/BDJ.7.e37518
  • The PPEAO experimental fishing dataset: Fish from West African estuaries, lagoons and reservoirs. Simier M, Ecoutin J, Tito de Morais L (2019). Biodiversity Data Journal 7: e31374. https://doi.org/10.3897/BDJ.7.e31374
  • A benchmark dataset of herbarium specimen images with label data. Dillen M, Groom Q, Chagnoux S, Güntsch A, Hardisty A, Haston E, Livermore L, Runnel V, Schulman L, Willemse L, Wu Z, Phillips S (2019). Biodiversity Data Journal 7: e31817. https://doi.org/10.3897/BDJ.7.e31817
  • Continental data on cave-dwelling spider communities across Europe (Arachnida: Araneae). Mammola S, Cardoso P, Angyal D, Balázs G, Blick T, Brustel H, Carter J, Ćurčić S, Danflous S, Dányi L, Déjean S, Deltshev C, Elverici M, Fernández J, Gasparo F, Komnenov M, Komposch C, Kováč L, Kunt KB, Mock A, Moldovan O, Naumova M, Pavlek M, Prieto CE, Ribera C, Rozwałka R, Růžička V, Vargovitsh RS, Zaenker S, Isaia M (2019) Continental data on cave-dwelling spider communities across Europe (Arachnida: Araneae). Biodiversity Data Journal 7: e38492. https://doi.org/10.3897/BDJ.7.e38492
  • Fungi of French Guiana gathered in a taxonomic, environmental and molecular dataset. Jaouen, G., Sagne, A., Buyck, B. et al. Fungi of French Guiana gathered in a taxonomic, environmental and molecular dataset. Sci Data 6, 206 (2019) https://doi.org/10.1038/s41597-019-0218-z
  • Standardised inventories of spiders (Arachnida, Araneae) of Macaronesia I: The native forests of the Azores (Pico and Terceira islands) Malumbres-Olarte J, Cardoso P, Crespo L, Gabriel R, Pereira F, Carvalho R, Rego C, Nunes R, Ferreira M, Amorim I, Rigal F, Borges P (2019) Standardised inventories of spiders (Arachnida, Araneae) of Macaronesia I: The native forests of the Azores (Pico and Terceira islands). Biodiversity Data Journal 7: e32625. https://doi.org/10.3897/BDJ.7.e32625
  • FLOTROP, a massive contribution to plant diversity data for open ecosystems in northern tropical Africa Taugourdeau, S., Daget, P., Chatelain, C. et al. FLOTROP, a massive contribution to plant diversity data for open ecosystems in northern tropical Africa. Sci Data 6, 118 (2019) https://doi.org/10.1038/s41597-019-0120-8
2018
  • Antarctic and Sub-Antarctic Asteroidea database. Moreau C, Mah C, Agüera A, Améziane N, Barnes D, Crokaert G, Eléaume M, Griffiths H, Guillaumot C, Hemery LG, Jażdżewska A, Jossart Q, Laptikhovsky V, Linse K, Neill K, Sands C, Saucède T, Schiaparelli S, Siciński J, Vasset N, Danis B (2018) ZooKeys 747: 141-156.  https://doi.org/10.3897/zookeys.747.22751
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